DisGeNET - a database of gene-disease associations

List of associated variants

Prediabetes syndrome, C0362046

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs7903146	TCF7L2	0.554	0.680	10	112998590	intron variant	C/G;T	snv			93
rs738409	PNPLA3	0.557	0.720	22	43928847	missense variant	C/G	snv	0.28	0.22	88
rs1501299	ADIPOQ ; ADIPOQ-AS1	0.597	0.720	3	186853334	intron variant	G/C;T	snv			52
rs5219	KCNJ11	0.701	0.360	11	17388025	stop gained	T/A;C	snv	0.64		25
rs10811661		0.724	0.400	9	22134095	intergenic variant	T/C	snv		0.14	22
rs4402960	IGF2BP2	0.724	0.400	3	185793899	intron variant	G/T	snv		0.38	21
rs7754840	CDKAL1	0.807	0.200	6	20661019	intron variant	G/A;C;T	snv			9
rs4607517	GCK	0.882	0.080	7	44196069	intron variant	G/A;C	snv			8
rs9356744	CDKAL1	0.882	0.120	6	20685255	intron variant	T/C	snv		0.42	7
rs5215	KCNJ11	0.827	0.160	11	17387083	missense variant	C/T	snv	0.64	0.71	7
rs1884613	LOC105372629	0.807	0.200	20	44351775	intron variant	C/A;G;T	snv			7
rs1408888	DACH1	0.851	0.120	13	71854515	intron variant	T/G	snv		0.30	5
rs2293855	MTMR9	0.851	0.120	8	11319901	non coding transcript exon variant	G/A	snv		0.35	5
rs1800849	UCP3	0.851	0.160	11	74009120	upstream gene variant	G/A;T	snv			5
rs867529	EIF2AK3	1.000	0.080	2	88613755	missense variant	G/C	snv	0.30	0.23	3
rs10986663	HSPA5	1.000	0.080	9	125237222	intron variant	A/G	snv		1.3E-02	1